Publications
Journal Articles
- L.E. Givon, A.A. Lazar, C.-H. Yeh. Generating Executable Models of the Drosophila Central Complex Frontiers in Behavioral Neuroscience, Vol. 11, No. 2012, May 2017. DOI: 10.3389/fnbeh.2017.00102
- L.E. Givon, A.A. Lazar. Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain PLoS ONE, Vol. 11, No. 1, January 2016. DOI: 10.1371/journal.pone.0146581.g005
Patents
- L.E. Givon, L.J. Mariano, A. Schneider, J. Irvine. Deep learning architecture for cognitive examination subscore trajectory prediction in Alzheimer's Disease January 26, 2021. USPTO: US10898125
Technical Reports
- L.E. Givon, A.A. Lazar. Generating an Executable Model of the Drosophila Central Complex Neurokernel Request for Comments, Neurokernel RFC #6, May 2016. DOI: 10.1101/051318
- L.E. Givon, A.A. Lazar. NeuroArch: A Graph dB for Querying and Executing Fruit Fly Brain Circuits Neurokernel Request for Comments, Neurokernel RFC #5, December 2015. DOI: 10.5281/zenodo.44225
- L.E. Givon, A.A. Lazar. Neurokernel: An Open Source Platform for Emulating the Fruit Fly Brain Neurokernel Request for Comments, Neurokernel RFC #4, October 2015. DOI: 10.5281/zenodo.31947
- L.E. Givon, A.A. Lazar. Neurokernel: An Open Scalable Software Framework for Emulation and Validation of Drosophila Brain Models on Multiple GPUs Neurokernel Request for Comments, Neurokernel RFC #1, February 2014. DOI: 10.5281/zenodo.11815
Conference Presentations & Posters
- L.E. Givon, C.A. Parmar, G.O. Cula, W. Schultz, P. Branigan, A. Stojmirovic, L.R. Ghanem, K. Standish. High Performance Estimation of Geboes Score in Ulcerative Colitis Using Multi-Instance Learning and Foundational Models. Digestive Disease Week 2024, Washington, D.C. USA, May 18-21, 2024.
- L.E. Givon, C.A. Parmar, G.O. Cula, W. Schultz, P. Branigan, A. Stojmirovic, L.R. Ghanem, D. Richards, T.C. Freeman, K. Standish. High Identification and Ranking of Gene Module Association with Histologic Features in Ulcerative Colitis. Digestive Disease Week 2024, Washington, D.C. USA, May 18-21, 2024.
- L.E. Givon, L.J. Mariano, D. O'Dowd, J.M. Irvine, A.R. Schneider, the Alzheimer's Disease Neuroimaging Initiative. Cognitive Subscore Trajectory Prediction in Alzheimer's Disease. BioImage Informatics Conference 2017, Banff, Canada, September 19-21, 2017. Conference on Machine Intelligence in Medical Imaging 2017, Baltimore, MD, September 26-27, 2017. Preprint: arXiv:1706.08491
- L.E. Givon, A.A. Lazar, K. Psychas, N.H. Ukani, C.-H Yeh, Y. Zhou. Neurokernel: Building an In Silico Fruit Fly Brain. IEEE EMBS BRAIN Grand Challenges Conference, IEEE, November 2014.
- L.E. Givon, A.A. Lazar, N.H. Ukani. Neuroarch: A Graph-Based Platform for Constructing and Querying Models of the Fruit Fly Brain Architecture Frontiers in Neuroinformatics, Number 42, August 2014, Leiden, The Netherlands. DOI: 10.3389/conf.fninf.2014.18.00042
- D.S. Chevitarese, L.E. Givon, A.A. Lazar, M. Vellasco. CircuitML: A Modular Language for Modeling Local Processing Units in the Drosophila Brain. Neuroinformatics 2013, August 27-29, 2013, Stockholm, Sweden. DOI: 10.3389/conf.fninf.2013.09.00011
- L.E. Givon, A.A. Lazar. Neurokernel: An Open Architecture for Massively Parallel Emulation of Drosophila Brain Models on Multiple GPUs. Computational Neuroscience Meeting 2012, July 21-24, 2012, Atlanta/Decatur, GA. DOI: 10.1186/1471-2202-13-S1-P99